diff --git a/drift_dev/lib/src/services/schema/verifier_impl.dart b/drift_dev/lib/src/services/schema/verifier_impl.dart
index 4b8d3664..4a7b551e 100644
--- a/drift_dev/lib/src/services/schema/verifier_impl.dart
+++ b/drift_dev/lib/src/services/schema/verifier_impl.dart
@@ -83,8 +83,8 @@ Input? _parseInputFromSchemaRow(
     Map<String, Object?> row, List<String> virtualTables) {
   final name = row['name'] as String;
 
-  // Skip sqlite-internal tables
-  if (name.startsWith('sqlite_autoindex')) return null;
+  // Skip sqlite-internal tables, https://www.sqlite.org/fileformat2.html#intschema
+  if (name.startsWith('sqlite_')) return null;
   if (virtualTables.any((v) => name.startsWith('${v}_'))) return null;
 
   return Input(name, row['sql'] as String);
diff --git a/drift_dev/test/services/schema/verifier_impl_test.dart b/drift_dev/test/services/schema/verifier_impl_test.dart
index b420b640..94979ba3 100644
--- a/drift_dev/test/services/schema/verifier_impl_test.dart
+++ b/drift_dev/test/services/schema/verifier_impl_test.dart
@@ -1,5 +1,7 @@
 import 'package:drift/drift.dart';
+import 'package:drift/native.dart';
 import 'package:drift_dev/api/migrations.dart';
+import 'package:drift_dev/src/services/schema/verifier_impl.dart';
 import 'package:test/test.dart';
 
 void main() {
@@ -33,6 +35,35 @@ void main() {
       driftRuntimeOptions.dontWarnAboutMultipleDatabases = false;
     });
   });
+
+  group('collectSchemaInput', () {
+    test('contains only user-defined entities', () async {
+      final db = _TestDatabase(NativeDatabase.memory(), 1);
+      addTearDown(db.close);
+
+      await db.customStatement('CREATE TABLE x1 (bar UNIQUE);');
+      await db.customStatement('CREATE VIEW x2 AS SELECT * FROM x1;');
+      await db.customStatement('CREATE INDEX x3 ON x1 (bar);');
+      await db.customStatement('CREATE TRIGGER x4 AFTER INSERT ON x1 BEGIN '
+          'DELETE FROM x1;'
+          'END;');
+
+      final inputs = await db.collectSchemaInput(const []);
+      expect(inputs.map((e) => e.name), ['x1', 'x2', 'x3', 'x4']);
+    });
+
+    test('does not contain shadow tables', () async {
+      final db = _TestDatabase(NativeDatabase.memory(), 1);
+      addTearDown(db.close);
+
+      await db.customStatement('CREATE VIRTUAL TABLE x USING fts5(foo, bar);');
+      await db
+          .customStatement('INSERT INTO x VALUES (?, ?)', ['test', 'another']);
+
+      final inputs = await db.collectSchemaInput(const ['x']);
+      expect(inputs.map((e) => e.name), ['x']);
+    });
+  });
 }
 
 class _TestHelper implements SchemaInstantiationHelper {